Visible to the public Invariant verification of nonlinear hybrid automata networks of cardiac cells

Verification algorithms for networks of nonlinear hybrid au- tomata (HA) can aid understanding and controling of biological processes such as cardiac arrhythmia, formation of memory, and genetic regulation. We present an algorithm for over-approximating reach sets of networks of nonlinear HA which can be used for sound and relatively complete invariant checking. First, it uses automatically computed input-to-state discrepancy functions for the individual automata modules in the network A for constructing a low-dimensional model M. Simulations of both A and M are then used to compute the reach tubes for A. These tech- niques enable us to handle a challenging verification problem involving a network of cardiac cells, where each cell has four continuous variables and 29 locations. Our prototype tool can check bounded-time invariants for networks with 5 cells (20 continuous variables, 29^5 locations) typically in less than 15 minutes for up to reasonable time horizons. From the computed reach tubes we can infer biologically relevant properties of the network from a set of initial states.

License: 
Creative Commons 2.5

Other available formats:

Invariant verification of nonlinear hybrid automata networks of cardiac cells
Switch to experimental viewer